PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00347.1.p
Common NameLOC105964165, MIMGU_mgv1a003291mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 595aa    MW: 65197.9 Da    PI: 6.2097
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00347.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like911e-28198251155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Migut.K00347.1.p 198 KPRVVWSIELHRKFVGAVNQL-GIEKAVPKRILDLMNVDGLTRENVASHLQKYRL 251
                       79*******************.********************************8 PP
2Response_reg82.31.5e-27191271109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ ++ll+++l+k +y +v+++++++ al++l+e++  +Dl++ D+ mp+mdG++ll+    e  +lp+i+++a+g+++++ + + 
  Migut.K00347.1.p  19 VLAVDDDPICLKLLETLLRKCQY-HVTTTSQARMALKMLRENKdrFDLVISDVHMPDMDGFKLLEYVGLEM-DLPVIMLSANGDPKLVMKGVT 109
                       799********************.***************888889**********************6644.8******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l+Kp+ +eel++
  Migut.K00347.1.p 110 HGACDYLVKPVRIEELRN 127
                       ****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363925.8E-1641592IPR017053Response regulator B-type, plant
Gene3DG3DSA:3.40.50.23002.0E-4316140No hitNo description
SuperFamilySSF521721.99E-3616141IPR011006CheY-like superfamily
SMARTSM004482.3E-3217129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011044.32218133IPR001789Signal transduction response regulator, receiver domain
PfamPF000729.7E-2519128IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.01E-2920133No hitNo description
PROSITE profilePS5129411.677195254IPR017930Myb domain
SuperFamilySSF466892.33E-19195255IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-29196256IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-24198251IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MTVEEIRGDG DNFPVGLRVL AVDDDPICLK LLETLLRKCQ YHVTTTSQAR MALKMLRENK  60
DRFDLVISDV HMPDMDGFKL LEYVGLEMDL PVIMLSANGD PKLVMKGVTH GACDYLVKPV  120
RIEELRNIWQ HVLRRKKCDN KNPKKSSGQV KSHQANGEGL GSPTGNADQN GKFNRKRKED  180
EDESEDNEND EDPSTQKKPR VVWSIELHRK FVGAVNQLGI EKAVPKRILD LMNVDGLTRE  240
NVASHLQKYR LYLKRISSAA SQQAHMAAAF GVKDSPFMHH MGSLDGLGDF RTLSSARLPN  300
VVLSPYTTTT NAMLGRLNSP SANVSLRNLS PSVGPLQPSQ AQNLSSSIAS LNKMNFGTQN  360
TSLFQGIPSH LEQNATNNNS KGILGTSNFN AIDELLNGAS FNPEPFDASG AFGSSNPLLS  420
STESFHSQLP LVNGSRRNDA SLNGAYLNTD FSSGVGLVGG EVHNMNYGNN IFGSLNSSNI  480
SGNGIVSRLG RSLGQNNAIS NQRMDGFVNG RSSVSGGSNL LQQNEIEKPV NELRQRSNED  540
SFLLEETRLN AGFVPQSYDS LDELVNAMIK REQDETVSNC EFQFDDDYAF GNGI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A9e-26194257164ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00347.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844135.10.0PREDICTED: two-component response regulator ARR12
SwissprotB8AEH11e-133ORR23_ORYSI; Two-component response regulator ORR23
SwissprotQ6K8X61e-133ORR23_ORYSJ; Two-component response regulator ORR23
TrEMBLA0A022QW240.0A0A022QW24_ERYGU; Two-component response regulator
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22582458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-112response regulator 12
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]