PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00349.1.p
Common NameLOC105964167, MIMGU_mgv1a011483mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 281aa    MW: 31853.5 Da    PI: 5.095
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00349.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.31.1e-20194247155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr  Wt e H++Fvea++ L G+e+A+P +il+lm+v+gLt e v+ HL +Y+l
  Migut.K00349.1.p 194 KPRFIWTVEFHKKFVEAINIL-GIEVAIPEQILDLMNVDGLTQEIVAIHLKMYKL 247
                       79*******************.*******************************97 PP
2Response_reg78.22.8e-26191261109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ ++ll+++l++ +y +va++++++ a+e+l e++  +Dl+++D+ mp++dG++ll+   e   ++p+++++a+g+++++++ + 
  Migut.K00349.1.p  19 VLAVDDDPISLKLLETLLRQCQY-HVAAMSQAKMAMEMLSENKyrFDLVITDVHMPDIDGFKLLELGLEL--DIPVVMLSANGDPKLIVKGIT 108
                       799********************.***************888888*******************975665..5******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                       +Ga d+l+Kp+ +ee+++
  Migut.K00349.1.p 109 RGACDYLVKPIRIEEVRN 126
                       **************9886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23007.0E-3816150No hitNo description
SuperFamilySSF521721.34E-3316145IPR011006CheY-like superfamily
SMARTSM004482.1E-2817128IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011040.56418132IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.5E-2319126IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.15E-2620132No hitNo description
Gene3DG3DSA:1.10.10.601.7E-20191252IPR009057Homeodomain-like
SuperFamilySSF466897.17E-13192251IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-14194247IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MTVEEIRGNG DNFPVGLRVL AVDDDPISLK LLETLLRQCQ YHVAAMSQAK MAMEMLSENK  60
YRFDLVITDV HMPDIDGFKL LELGLELDIP VVMLSANGDP KLIVKGITRG ACDYLVKPIR  120
IEEVRNIWKH LLRRKNCDPN NQTKSSDQVK SPEVLFNGNR KDGEENENDC KDPSIQNNGE  180
ENENNCNDPS RQNKPRFIWT VEFHKKFVEA INILGIEVAI PEQILDLMNV DGLTQEIVAI  240
HLKMYKLYLR RLREIQTLPN VALSPYSATV QPSQAQSLSN *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-15192252363ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00349.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844137.10.0PREDICTED: two-component response regulator ARR12-like isoform X1
SwissprotA2X1N26e-93ORR24_ORYSI; Two-component response regulator ORR24
SwissprotQ6H8057e-93ORR24_ORYSJ; Two-component response regulator ORR24
TrEMBLA0A022QV470.0A0A022QV47_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22582458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.15e-79response regulator 12
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]