PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.K00375.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

NAC

Protein Properties

Length: 324aa MW: 37240.1 Da PI: 9.5389

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.K00375.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.1	4e-28	15	83	63	129
NAM 63 krdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrle 129 +rd+ky+tg+r+nrat+sgyWkatgkdke++++ k++lvg+kktLvfykgrapkg kt+Wvmheyrle Migut.K00375.1.p 15 QRDRKYPTGTRTNRATESGYWKATGKDKEIYKTrsKNHLVGMKKTLVFYKGRAPKGDKTNWVMHEYRLE 83 689**************************98666777**************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	34.198	1	107	IPR003441	NAC domain
SuperFamily	SSF101941	4.71E-31	15	107	IPR003441	NAC domain
Pfam	PF02365	8.7E-13	23	82	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
KRQRWEKKKG TSSRQRDRKY PTGTRTNRAT ESGYWKATGK DKEIYKTRSK NHLVGMKKTL 60 VFYKGRAPKG DKTNWVMHEY RLEGNFSDYN FSRAAKEEFV VSRVFHKSTG VRRNPGDELA 120 RIDHGPTLPP LTDYNPSSDY YQTNDYYKKD AIASPPSSSR VFLENHKLEM QYDPKNFLVP 180 PHQNYTNPIF YTQNTLPSSM FPYQAPPPSS SSLASYNHYQ DGLISYPNNI FPFKGGDYYY 240 NNQENNSRLV APKMEQYFSS NNSVISHSQD TGISTENINN AVEINSVHSS KGDVESKKAF 300 DQELEGLEFS PSNIPDFDSF WNN*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	6e-22	16	113	79	171	NO APICAL MERISTEM PROTEIN
1ut4_B	6e-22	16	113	79	171	NO APICAL MERISTEM PROTEIN
1ut7_A	6e-22	16	113	79	171	NO APICAL MERISTEM PROTEIN
1ut7_B	6e-22	16	113	79	171	NO APICAL MERISTEM PROTEIN
3swm_A	6e-22	16	113	82	174	NAC domain-containing protein 19
3swm_B	6e-22	16	113	82	174	NAC domain-containing protein 19
3swm_C	6e-22	16	113	82	174	NAC domain-containing protein 19
3swm_D	6e-22	16	113	82	174	NAC domain-containing protein 19
3swp_A	6e-22	16	113	82	174	NAC domain-containing protein 19
3swp_B	6e-22	16	113	82	174	NAC domain-containing protein 19
3swp_C	6e-22	16	113	82	174	NAC domain-containing protein 19
3swp_D	6e-22	16	113	82	174	NAC domain-containing protein 19
4dul_A	6e-22	16	113	79	171	NAC domain-containing protein 19
4dul_B	6e-22	16	113	79	171	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.K00375.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012840265.1	0.0	PREDICTED: NAC domain-containing protein 100-like
TrEMBL	A0A022R7R8	0.0	A0A022R7R8_ERYGU; Uncharacterized protein
STRING	Migut.K00375.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA152	24	279

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.2	3e-52	NAC domain containing protein 80

Link Out ? help Back to Top
Phytozome	Migut.K00375.1.p