PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.K00584.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 153aa MW: 17370.8 Da PI: 12.5124

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.K00584.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00075	117	138	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 ++C+ Cg+ F + +Lk+H r+ Migut.K00584.1.p 117 HPCSVCGEIFHNTNLLKHHHRR 138 78********999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence Send to blast
MFTTGRRSFL FNFFSLLSIL LLHLGCFTFS SRHRRRDSSS TSSFFKKKLT RPPKPGLVSF 60 LRRLFSSSIN HHTPTHPPTS IPSPSSSTRS LRLNPPPTTT TTTHQSDTTT TTTNQIHPCS 120 VCGEIFHNTN LLKHHHRRQN QMIRDVKSRS AR*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.K00584.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012845413.1	2e-88	PREDICTED: rho GTPase-activating protein gacK-like, partial
TrEMBL	A0A2G9HXG3	4e-16	A0A2G9HXG3_9LAMI; Uncharacterized protein

Link Out ? help Back to Top
Phytozome	Migut.K00584.1.p