PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00589.1.p
Common NameMIMGU_mgv1a019786mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 206aa    MW: 22397 Da    PI: 7.9776
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00589.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding452.5e-14134178347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E+  ++d+ ++lG+g+W+ I+r+   +Rt+ q+ s+ qky
  Migut.K00589.1.p 134 PWTEDEHRTFLDGLEKLGKGDWRGISREYVSTRTPTQIASHAQKY 178
                       8*****************************9*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.60.101.2E-4320IPR001878Zinc finger, CCHC-type
PROSITE profilePS501588.845318IPR001878Zinc finger, CCHC-type
PROSITE profilePS5129418.322127183IPR017930Myb domain
SuperFamilySSF466895.53E-17129183IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7E-11131177IPR009057Homeodomain-like
SMARTSM007178.9E-11131181IPR001005SANT/Myb domain
TIGRFAMsTIGR015572.4E-18131182IPR006447Myb domain, plants
PfamPF002493.5E-12134178IPR001005SANT/Myb domain
CDDcd001672.55E-10134179No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MGRKCSECGK VGHNSRTCTT SASRSGLVAD DRDDDVIING GGGGIRLFGV RIDDDVIISS  60
SALSSSLIIT PMKKSLRFDS LPIMILTPPA APSSSSSSSI YDNSDNNNNT FTAGGYLSDD  120
PLIHQPPERR KGVPWTEDEH RTFLDGLEKL GKGDWRGISR EYVSTRTPTQ IASHAQKYFL  180
RQTTKKTKHR SSLFDMVGAD NDQCL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00589.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845524.11e-150PREDICTED: transcription factor MYB1R1
TrEMBLA0A022QTK81e-143A0A022QTK8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33852147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.15e-45MYB_related family protein