PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00678.1.p
Common NameMIMGU_mgv1a005545mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 458aa    MW: 51512.6 Da    PI: 7.0932
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00678.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.12e-23197250155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r++W+ +LH++F+eav++  G++k  Pk+il++m+v+ Lt+e+v+SHLQkYRl
  Migut.K00678.1.p 197 KARVVWSVDLHQKFIEAVDHF-GIDKVGPKRILDFMEVPWLTRENVASHLQKYRL 250
                       68*******************.********************************8 PP
2Response_reg63.88.8e-22211272107
                       EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedalealk 91 
                       l +d +p+ +++l+ +l+k +y +va++ +++eal+ll++++  +D+++ D+++ + +dGl++l++ r +  +lp+i+++a ge ++a++a++
  Migut.K00678.1.p  21 LGIDGDPACLNNLEHMLRKCNY-QVATCNSSQEALNLLQKQKngFDIVISDVSIFDdVDGLKFLEHVRLKM-DLPVIMMSADGETSTAKKAIE 111
                       668999****************.***************999999*********9988**********9966.********************* PP

                       TTESEEEESS--HHHH CS
      Response_reg  92 aGakdflsKpfdpeel 107
                        Ga d+++Kp + + l
  Migut.K00678.1.p 112 NGACDYFVKPLKTKVL 127
                       **********987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.34E-2718142IPR011006CheY-like superfamily
SMARTSM004486.5E-2218131IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23006.7E-3318170No hitNo description
PROSITE profilePS5011036.96519135IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.2E-1920128IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.95E-2023128No hitNo description
SuperFamilySSF466898.96E-17195254IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-25195255IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-22197250IPR006447Myb domain, plants
PfamPF002491.3E-5199249IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MDPNRFTSKG PGSFSPVLRV LGIDGDPACL NNLEHMLRKC NYQVATCNSS QEALNLLQKQ  60
KNGFDIVISD VSIFDDVDGL KFLEHVRLKM DLPVIMMSAD GETSTAKKAI ENGACDYFVK  120
PLKTKVLRYI WQHVYRKRLR EMRDIEGQQQ SVDQIQSVDQ IQSDDILSGD KRKDLVNNNN  180
NNNSSSQERD PQSSTKKARV VWSVDLHQKF IEAVDHFGID KVGPKRILDF MEVPWLTREN  240
VASHLQKYRL YLSRLEKENE LKTASSGPGS KNRGDAMNHH PPISSNTTIS PINYNRAFGS  300
EVKPKPELQL RQQAWNTQSA PPFQFNQPPP PNPYFHNRFE NHLPLATVTR KNTQVDYFPN  360
KPMYDSLRSS CGIWEEGFNG YASSSSSHGG FCNTPSPAFV NLESFGFIGP DDLIGESSSQ  420
FPYPQYPSEY QGQLNEGAYA PSFSTAQLYA PSLSTAQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-18193255163ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity). {ECO:0000250, ECO:0000269|PubMed:12610214}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00678.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851300.10.0PREDICTED: two-component response regulator ARR11
SwissprotQ9FXD63e-86ARR11_ARATH; Two-component response regulator ARR11
TrEMBLA0A022QHI70.0A0A022QHI7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67882433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.14e-74response regulator 11
Publications ? help Back to Top
  1. Zwack PJ, et al.
    Cytokinin Response Factor 6 Represses Cytokinin-Associated Genes during Oxidative Stress.
    Plant Physiol., 2016. 172(2): p. 1249-1258
    [PMID:27550996]
  2. Meng WJ, et al.
    Type-B ARABIDOPSIS RESPONSE REGULATORs Specify the Shoot Stem Cell Niche by Dual Regulation of WUSCHEL.
    Plant Cell, 2017. 29(6): p. 1357-1372
    [PMID:28576846]