PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00728.1.p
Common NameLOC105970871, MIMGU_mgv1a015880mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NF-YC
Protein Properties Length: 143aa    MW: 16250.7 Da    PI: 10.1302
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00728.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC48.52e-15211011897
             NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 
                       + elP  r+k+i+k d+d++++ +ea  l++ + elf+  l+ +s l + e+k+rt++   i aa++r   + dfl+d  p
  Migut.K00728.1.p  21 KLELPTRRVKNIMKLDKDINKVNSEALFLIASSTELFLQFLAEKSALVTLEKKKRTVRIDHIRAATKRHRpTADFLLDSLP 101
                       4589**************************************************************9975389*****988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471133.52E-1620104IPR009072Histone-fold
PfamPF008086.5E-162385IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene3DG3DSA:1.10.20.102.3E-1824101IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MTEQVEEEEQ NPTAIDEPPH KLELPTRRVK NIMKLDKDIN KVNSEALFLI ASSTELFLQF  60
LAEKSALVTL EKKKRTVRID HIRAATKRHR PTADFLLDSL PMPPQPSDHQ NNPPKDRAKS  120
KTDKKPVPFA TKSIDAFFHK ST*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00728.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851147.16e-98PREDICTED: nuclear transcription factor Y subunit gamma
TrEMBLA0A022QF661e-96A0A022QF66_ERYGU; Uncharacterized protein
STRINGMigut.K00728.1.p2e-97(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA114352425
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.13e-44nuclear factor Y, subunit C13