PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00745.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 569aa    MW: 64612.9 Da    PI: 5.2435
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00745.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1821.4e-5661331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtdeelv +yL++k++g+k++l e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++
  Migut.K00745.1.p   6 LPPGFRFHPTDEELVAYYLNRKINGRKIDL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRK 97 
                       79****************************.99***************6434555777*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       v s + ++vg+kktLv+y+grap+g++tdWvmheyrl
  Migut.K00745.1.p  98 VNS-QARAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133
                       ***.9999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-634156IPR003441NAC domain
PROSITE profilePS5100561.6376156IPR003441NAC domain
PfamPF023655.9E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLNRKING RKIDLEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QARAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECEI PTGLQDAYAL CRVFKKSLNI PKVGDHYVNS SSSSVDYQLP  180
LTSLSTPINI TGSSSSNDAS WAHYLSDEAF NPYSNCAPTP FPPSKVDIAL ECSRLQNRFS  240
LPALEVQDYN IQPHFPNYNP GMMTSYSSPN NFHENQPHDI VQEILSVAQD LQNNQRDPLY  300
APVDDFSFFL QSSNQQQPDQ MSPFKYIDNN IHTSIEIGDI HNSDHLFQSE RMVENLRWVG  360
MSNEELEKAF SDEYKTVPIE NFSSMQREYH DFQGETSNHN FNPFTNTIDD EANDDNISIG  420
HLNNNDGDNI NNGSDNNNFL EDGDLDDFSS TPNFDLYEGK LLVSTRQTPN TFYHKVVPSR  480
TVQVLMNPTV MVRQFPSLPK SSSNYNGSLS EKLVSFSRNM LSVVKSKNCA SARVVEGGEV  540
NNIKPYLTFA LALCAIWVQI VTPFSLIV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-57115612165NO APICAL MERISTEM PROTEIN
1ut4_B8e-57115612165NO APICAL MERISTEM PROTEIN
1ut7_A8e-57115612165NO APICAL MERISTEM PROTEIN
1ut7_B8e-57115612165NO APICAL MERISTEM PROTEIN
4dul_A8e-57115612165NAC domain-containing protein 19
4dul_B8e-57115612165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00745.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835579.10.0PREDICTED: NAC domain-containing protein 86
TrEMBLA0A022RF030.0A0A022RF03_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.K00745.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-134NAC domain containing protein 28