PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01061.1.p
Common NameMIMGU_mgv1a009662mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 353aa    MW: 38673.7 Da    PI: 5.4139
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01061.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix90.42e-2841135186
          trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                       rWt+qe+l+Li+++r  e+r+rrg+          ++p+W+++s++++++g++r+p+qC+++w+nl++++kkike+e+k ++e++s +++ ++
  Migut.K01061.1.p  41 RWTRQEILVLIQGKRVAENRVRRGRasgsafgsgHIEPKWASISSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESKIKEETESFWVMRND 133
                       8**********************87777788888***********************************************9*9999*99999 PP

          trihelix  85 le 86 
                       l+
  Migut.K01061.1.p 134 LR 135
                       86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-541106IPR009057Homeodomain-like
PfamPF138374.5E-1241131No hitNo description
PROSITE profilePS500906.53941107IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050777Biological Processnegative regulation of immune response
GO:0071219Biological Processcellular response to molecule of bacterial origin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MALEQLSLGT GPVDGGADGR QPSGDGGGGG DEGTKTARLP RWTRQEILVL IQGKRVAENR  60
VRRGRASGSA FGSGHIEPKW ASISSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWESKI  120
KEETESFWVM RNDLRRERKL PGFFDREVYD ILDGGVGAGG GEDLEMGGEL SLALAPASAV  180
GEEGADQEAL FDSGRSTAAD DGLFSDFEQS GQEEAIRSKE TTVKDIPAPT PISVAEKKRY  240
QLFHEESPGQ GINNDKQPES EEATAQQGRK RKRRETDVDE GETNTNTNTN TKNIEHKLVE  300
ALEKNGKLLS SQIEAQNSNL QLDREQRNEH VNSLITVLNK LADAFGRIAD KL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268273RKRKRR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00288DAPTransfer from AT2G33550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01061.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848234.10.0PREDICTED: uncharacterized protein LOC105968158
SwissprotQ8VZ201e-121ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLA0A022QLL10.0A0A022QLL1_ERYGU; Uncharacterized protein
STRINGMigut.K01061.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.18e-81Trihelix family protein
Publications ? help Back to Top
  1. Vidal EA, et al.
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
    BMC Genomics, 2013. 14: p. 701
    [PMID:24119003]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]