PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01308.1.p
Common NameMIMGU_mgv1a011270mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 288aa    MW: 32809 Da    PI: 6.7102
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01308.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM136.91.3e-42201321128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeel+++yL++kv ++++++ +vi +vd++kvePw+Lp k+k +ekewyfF+ rd++              +Wkatgkdke++
  Migut.K01308.1.p  20 LPPGFRFHPTDEELITHYLCPKVLNTTFTT-KVIGDVDLNKVEPWELPWKAKMGEKEWYFFCIRDRNW-------------IWKATGKDKEIF 98 
                       79*************************999.99***************888999*********98853.............6*********** PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +  ++l g+kktLvfykgrap+gekt+Wvmheyrl
  Migut.K01308.1.p  99 Q-AKKLAGMKKTLVFYKGRAPRGEKTNWVMHEYRL 132
                       *.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-5213157IPR003441NAC domain
PROSITE profilePS5100542.37220157IPR003441NAC domain
PfamPF023653.9E-2521132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MENFNRISSS STTYDEPIEL PPGFRFHPTD EELITHYLCP KVLNTTFTTK VIGDVDLNKV  60
EPWELPWKAK MGEKEWYFFC IRDRNWIWKA TGKDKEIFQA KKLAGMKKTL VFYKGRAPRG  120
EKTNWVMHEY RLDGTNSGFN LPKTAKNEWV ISRIFKKSSG GKKVHISGLI RSGDCRSDLP  180
PLTGIAHEAE RSHVSCFSNS IMDEKSVDEF SSCSKNNDYY TPTAQFIFSK SPNLNSGTVV  240
NSSCPHSISL QDHSVFGVND DISNLEVGFK PYEDDAEPVE FDCLWNY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-441816315171NO APICAL MERISTEM PROTEIN
1ut4_B2e-441816315171NO APICAL MERISTEM PROTEIN
1ut7_A2e-441816315171NO APICAL MERISTEM PROTEIN
1ut7_B2e-441816315171NO APICAL MERISTEM PROTEIN
3swm_A2e-441816318174NAC domain-containing protein 19
3swm_B2e-441816318174NAC domain-containing protein 19
3swm_C2e-441816318174NAC domain-containing protein 19
3swm_D2e-441816318174NAC domain-containing protein 19
3swp_A2e-441816318174NAC domain-containing protein 19
3swp_B2e-441816318174NAC domain-containing protein 19
3swp_C2e-441816318174NAC domain-containing protein 19
3swp_D2e-441816318174NAC domain-containing protein 19
4dul_A2e-441816315171NAC domain-containing protein 19
4dul_B2e-441816315171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtBinds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01308.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840519.10.0PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 100-like
SwissprotQ9FLJ24e-88NC100_ARATH; NAC domain-containing protein 100
TrEMBLA0A022R3U50.0A0A022R3U5_ERYGU; Uncharacterized protein
STRINGMigut.K01308.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15224279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.12e-90NAC domain containing protein 100
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]