PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00137.1.p
Common NameMIMGU_mgv1a026929mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 373aa    MW: 40555.8 Da    PI: 6.5472
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00137.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.82.4e-07158179223
                       EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                        C++Cgk F+r  nL+ H+r H
  Migut.L00137.1.p 158 FCEICGKGFKRDANLRMHMRAH 179
                       6*******************99 PP
2zf-C2H2110.0013249272123
                       EEETTTT.EEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCg.ksFsrksnLkrHirtH 23 
                       y+C+ C+ ksFs   +Lk+H++ +
  Migut.L00137.1.p 249 YSCNRCNnKSFSVVADLKSHLKHC 272
                       99*******************977 PP
3zf-C2H211.20.0011281296621
                       TTEEESSHHHHHHHHH CS
           zf-C2H2   6 CgksFsrksnLkrHir 21 
                       Cg++Fsrk+ L  H+ 
  Migut.L00137.1.p 281 CGTTFSRKDKLFGHMA 296
                       **************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.04E-6154180No hitNo description
SMARTSM003550.0015157179IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.967157184IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.0E-5157179IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF128740.002158177No hitNo description
PROSITE patternPS000280159179IPR007087Zinc finger, C2H2
SMARTSM0035599211244IPR015880Zinc finger, C2H2-like
SMARTSM0035513249271IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MSFPGDIRHT PAATKPPSTS SAAAAAAADP RVPLMNLSGV QARMDILQRF LSDSVNSNTL  60
LGQPQMDMVS SEISSAIHQI IVNGAALLSC TPPLSFVYKQ EEKVSNPGHP DPNPVQIVKD  120
PKVEIHVADE AAAAASAADD HDIIEMDAVE LLAEHVHFCE ICGKGFKRDA NLRMHMRAHG  180
NQFKTAEALA KPEKVVGGGG GDSIGRRTTR FSCPYVGCNR NKQHKKFRPL KSGVCVKNHF  240
KRSHCPKMYS CNRCNNKSFS VVADLKSHLK HCGESKWLCS CGTTFSRKDK LFGHMALFEG  300
HMPAVNDELV AGGEDEDKET GRNMEEGNNG IFEGLLDGFD SIEDCCFQDH TMNPSSSLDN  360
LDDCGMEGFF NF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00137.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853583.10.0PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like
TrEMBLA0A022Q8S40.0A0A022Q8S4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA100002126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.25e-79C2H2 family protein