PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00642.1.p
Common NameMIMGU_mgv1a024956mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 134aa    MW: 15978.5 Da    PI: 9.6775
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00642.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF291.4e-09650347
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                      i n+s+r+  f k    +  KA+ELS+LC++e+a+ii  +  +ly
  Migut.L00642.1.p  6 IPNESKRNEIFKKKTVRLVNKANELSTLCGVEAAIIIHKKGRRLY 50
                      7899999999****9*********************987766666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006612.783156IPR002100Transcription factor, MADS-box
SuperFamilySSF554557.06E-13294IPR002100Transcription factor, MADS-box
PfamPF003193.9E-11650IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MKHELIPNES KRNEIFKKKT VRLVNKANEL STLCGVEAAI IIHKKGRRLY DIGEDNAMLW  60
PSPPIFSERL HKFLNHPDSE IRRRMVKHEK FMEQIKEEER ENVSKWEMRC ELQESRQLLN  120
ELMETRSHGR LFP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00642.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831259.12e-74PREDICTED: agamous-like MADS-box protein AGL80
TrEMBLA0A022QKY33e-92A0A022QKY3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37820129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31630.12e-11AGAMOUS-like 86