PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00834.1.p
Common NameMIMGU_mgv1a020134mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 201aa    MW: 23731 Da    PI: 6.6065
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00834.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.43.7e-131150342
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                      i n+s+r+ tf k   g+ KK +ELS+LC++eva+ii  +
  Migut.L00834.1.p 11 IPNESKRNETFEKKTDGLVKKENELSTLCGVEVAIIIHKQ 50
                      889*********************************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004322.7E-8160IPR002100Transcription factor, MADS-box
PROSITE profilePS5006616.904161IPR002100Transcription factor, MADS-box
SuperFamilySSF554551.78E-163101IPR002100Transcription factor, MADS-box
PRINTSPR004046.8E-10323IPR002100Transcription factor, MADS-box
PfamPF003191.9E-131149IPR002100Transcription factor, MADS-box
PRINTSPR004046.8E-102338IPR002100Transcription factor, MADS-box
PRINTSPR004046.8E-103859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MARARTKHEL IPNESKRNET FEKKTDGLVK KENELSTLCG VEVAIIIHKQ RHHRYDLGED  60
NAMLWPSPPI FRDRLHKFLD CSDFKKRRRM VKHEKFMEQI TKKERENVSK WERRCELQES  120
RQLMNELREQ DHMDDYFNEV ELYHLNGLNS LVENMLTKLE TTSMNVLENL RHDEWFLGAM  180
SEDPPPPPSD AGGSVNMPNL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00834.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831231.11e-148PREDICTED: agamous-like MADS-box protein AGL86
TrEMBLA0A022RQR61e-140A0A022RQR6_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37820129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65300.12e-14AGAMOUS-like 38