PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00934.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family E2F/DP
Protein Properties Length: 190aa    MW: 21393.5 Da    PI: 10.0998
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00934.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP43.26.7e-143672471
           E2F_TDP 24 ivtlnevakeLvse............dvknkrRRiYDilNVLealnliek.....kekneirwkg 71
                       ++l+++ak L+ +            +   k+RR+YDi+NVL++++ iek     ++k+++rw g
  Migut.L00934.1.p  3 LISLEDAAKLLLGDgkhtsmttrisfNSPAKVRRLYDIANVLSSMKFIEKihhpeTRKPAFRWLG 67
                      689**********9************77789********************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM013721.4E-5167IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467857.75E-8468IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF023191.1E-10467IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene3DG3DSA:1.10.10.101.4E-12569IPR011991Winged helix-turn-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005667Cellular Componenttranscription factor complex
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MDLISLEDAA KLLLGDGKHT SMTTRISFNS PAKVRRLYDI ANVLSSMKFI EKIHHPETRK  60
PAFRWLGLNG KPDNGIVDSK KRIFGTDLTN TAKRFKVDED GLQILKPVNL MRVKNENENE  120
DDRTTTMGAK SYLFGPFAPA NVPQVGVSND YKGKQVVDWE SLASTYRPKY HNQGIFLKLL  180
ISSYQNIFS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00934.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837792.11e-139PREDICTED: E2F transcription factor-like E2FE isoform X1
RefseqXP_012837794.11e-139PREDICTED: E2F transcription factor-like E2FE isoform X3
TrEMBLA0A022QN481e-118A0A022QN48_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.L00934.1.p1e-139(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.14e-36DP-E2F-like 1