PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00993.1.p
Common NameMIMGU_mgv1a025983mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 132aa    MW: 14773.3 Da    PI: 4.3774
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00993.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-1879131254
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       rk+ ++tkeq + Le+ F  n++++++e+e LA +l+L+ rqV vWFqNrRa+
  Migut.L00993.1.p  79 RKKLRLTKEQSRLLEQTFLHNQTLNHKEKESLAIELKLKPRQVEVWFQNRRAR 131
                       78889**********************************************98 PP
2HD-ZIP_I/II71.51.7e-2379131153
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRAR 53 
                       +kk+rl+keq++lLE++F ++++L++++K++la eL+l+prqv+vWFqnrRAR
  Migut.L00993.1.p  79 RKKLRLTKEQSRLLEQTFLHNQTLNHKEKESLAIELKLKPRQVEVWFQNRRAR 131
                       69****************9999******************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.1E-1950131IPR009057Homeodomain-like
SuperFamilySSF466891.07E-1867131IPR009057Homeodomain-like
PROSITE profilePS5007117.11975131IPR001356Homeobox domain
SMARTSM003892.3E-1077131IPR001356Homeobox domain
CDDcd000863.29E-1878131No hitNo description
PfamPF000468.8E-1679131IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MDFLAINNND SANLELTIAP PDFSLSPISF PYSSGGSGGA MKEVDINQVP SSGTEEECMQ  60
EEEEDDDEDE SPNGGPGPRK KLRLTKEQSR LLEQTFLHNQ TLNHKEKESL AIELKLKPRQ  120
VEVWFQNRRA R*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00993.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833364.12e-60PREDICTED: homeobox-leucine zipper protein HOX3-like
SwissprotQ8S9N63e-32ATB17_ARATH; Homeobox-leucine zipper protein ATHB-17
TrEMBLA0A022RPF78e-91A0A022RPF7_ERYGU; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.12e-30homeobox-leucine zipper protein 17
Publications ? help Back to Top
  1. Zhao P, et al.
    ATHB17 enhances stress tolerance by coordinating photosynthesis associated nuclear gene and ATSIG5 expression in response to abiotic stress.
    Sci Rep, 2017. 7: p. 45492
    [PMID:28358040]