PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01064.1.p
Common NameLOC105969895, MIMGU_mgv1a006045mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CO-like
Protein Properties Length: 461aa    MW: 52282.9 Da    PI: 4.7563
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01064.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box29.91.2e-091760340
          zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                       r C+++ +k+++++C  ++ +lC++C ++ H+       H++v
  Migut.L01064.1.p 17 VRACDNCVRKRARWYCAADDAFLCQSCDSSVHSAnplarrHERV 60
                      578*****************************667888888876 PP
2CCT66.29.4e-23405448144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       R+a+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a
  Migut.L01064.1.p 405 RQARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 448
                       99****************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011911.1211562IPR000315B-box-type zinc finger
SMARTSM003368.4E-121562IPR000315B-box-type zinc finger
CDDcd000217.83E-101862No hitNo description
PfamPF006432.7E-81860IPR000315B-box-type zinc finger
PfamPF062031.3E-17405447IPR010402CCT domain
PROSITE profilePS5101715.964405447IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0016020Cellular Componentmembrane
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MISSDRNMAS AVGGKSVRAC DNCVRKRARW YCAADDAFLC QSCDSSVHSA NPLARRHERV  60
RLKTTSFKSS LDGSSDQLPQ IQIPPPTWHQ GFTRKARTPR QKKNNSNKQR SSFGHLVPEI  120
CSEADNSNEE EEEEENEEQL LYRVPIFDPF VAELCTPFNN NNNNNNNNNN NIHNGTETCE  180
SKGELVISDG GFGEEMNHLQ GFLPSEMDLA EFAADVESLL GKGLEDESFD MEGLGLLDCD  240
DEREKLKWAN LVSERVKVED DDEECNNGEF IDIGRETFEL NFDYNSPITG EDEEEEEEDN  300
KIENVEPIAM NNFEDSNSKM FDSKKIFLRL DYDGVLSSWD ERKSPWTTGE RPDLDSDECW  360
PDCSGTCGKM HVYGNHHHDM GMMMMMMGGG GTHSGAVVAS VDGGRQARVS RYREKRRTRL  420
FSKKIRYEVR KLNAEKRPRM KGRFVKRANF VAQAFALLNK *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1415431RRTRLFSKKIRYEVRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01064.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850120.10.0PREDICTED: zinc finger protein CONSTANS-LIKE 16-like
TrEMBLA0A022QHL20.0A0A022QHL2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15392470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25440.14e-96B-box type zinc finger protein with CCT domain