PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.L01088.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bZIP

Protein Properties

Length: 460aa MW: 51675.6 Da PI: 8.9703

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.L01088.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32	2.7e-10	173	215	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k rr+++NReAAr+sR RKka+i++Le+ ++L++ ++Lk Migut.L01088.1.p 173 KMLRRLAQNREAARKSRMRKKAYIQQLENGRQKLTQLETELKR 215 7789*************************99999999988875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.9E-9	169	240	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.599	171	215	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.0E-7	173	216	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.38E-8	173	218	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.9E-9	174	218	No hit	No description
PROSITE pattern	PS00036	0	176	191	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	4.6E-30	258	331	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence Send to blast
MSVFVEIKVF FVSFLCMFFS SSCIYKYKYI FRSEDGRNNG ARFADLGELE QSAGNGNNGF 60 HHTNDAAVNL TTRFGFQLRC LQQELIPASS FQIREQWRWL GGGAAARWVV VGGFGKLSFL 120 IIGGDSGVVA DHSQQTDTST DTDDKNQYPG ARHERLMGVD SMDNSNRKIG DQKMLRRLAQ 180 NREAARKSRM RKKAYIQQLE NGRQKLTQLE TELKRTRQQN VFVASGFSGD QSHLLGGNGA 240 LAFDTDYSKW LDEQNRLIND LRSAVNSHVS DSELRLLVEN VMSHYEEIFR LKSIGAKSDI 300 FHILSGMWKT PAERCFMWLG GFRCSEVLKI LGNQIEPLTE QQVMGICNLQ QSSQQAEDAL 360 SQGMEALQQS LVDTLSSNSL GPRSSGNVAE YMGHMAIAMS KLATLENFLH QADLLRQQTL 420 QQLQRILTTR QAARALLAIS DHKSRLRALS SLWLARPKE*

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence Send to blast

MSVFVEIKVF FVSFLCMFFS SSCIYKYKYI FRSEDGRNNG ARFADLGELE QSAGNGNNGF  60
HHTNDAAVNL TTRFGFQLRC LQQELIPASS FQIREQWRWL GGGAAARWVV VGGFGKLSFL  120
IIGGDSGVVA DHSQQTDTST DTDDKNQYPG ARHERLMGVD SMDNSNRKIG DQKMLRRLAQ  180
NREAARKSRM RKKAYIQQLE NGRQKLTQLE TELKRTRQQN VFVASGFSGD QSHLLGGNGA  240
LAFDTDYSKW LDEQNRLIND LRSAVNSHVS DSELRLLVEN VMSHYEEIFR LKSIGAKSDI  300
FHILSGMWKT PAERCFMWLG GFRCSEVLKI LGNQIEPLTE QQVMGICNLQ QSSQQAEDAL  360
SQGMEALQQS LVDTLSSNSL GPRSSGNVAE YMGHMAIAMS KLATLENFLH QADLLRQQTL  420
QQLQRILTTR QAARALLAIS DHKSRLRALS SLWLARPKE*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.L01088.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011077152.1	0.0	transcription factor HBP-1b(c38)-like
Swissprot	P23923	1e-157	HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBL	A0A4D9A4X8	0.0	A0A4D9A4X8_SALSN; Transcription factor TGA
STRING	Migut.L01088.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA820	23	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-129	bZIP family protein

Link Out ? help Back to Top
Phytozome	Migut.L01088.1.p

Publications ? help Back to Top
Tabata T,Nakayama T,Mikami K,Iwabuchi M HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143]