PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01205.1.p
Common NameMIMGU_mgv1a024011mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 510aa    MW: 56376.4 Da    PI: 8.2301
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01205.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025440462123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++Cp C+++F++   L  H r+H
  Migut.L01205.1.p 440 HVCPFCDRVFKNGQALGGHKRSH 462
                       79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.78E-5329No hitNo description
SMARTSM003550.17628IPR015880Zinc finger, C2H2-like
PfamPF139123.1E-5628IPR007087Zinc finger, C2H2
PROSITE profilePS501578.85628IPR007087Zinc finger, C2H2
PROSITE patternPS000280828IPR007087Zinc finger, C2H2
PROSITE profilePS501579.97286113IPR007087Zinc finger, C2H2
SMARTSM003550.3986108IPR015880Zinc finger, C2H2-like
PfamPF139129.4E-688110IPR007087Zinc finger, C2H2
PROSITE patternPS00028088108IPR007087Zinc finger, C2H2
PROSITE profilePS501578.974359386IPR007087Zinc finger, C2H2
SMARTSM003556.3359381IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.32E-6359381No hitNo description
PfamPF139124.9E-8359383IPR007087Zinc finger, C2H2
PROSITE patternPS000280361381IPR007087Zinc finger, C2H2
SuperFamilySSF576671.32E-6435462No hitNo description
SMARTSM003550.015440462IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.141440462IPR007087Zinc finger, C2H2
PfamPF139125.9E-8440462IPR007087Zinc finger, C2H2
PROSITE patternPS000280442462IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MMESRFVCKF CNKKYPCGKS LGGHMRSHVV AISAESDDKF EVTMKESKNG ESGNGGVSSS  60
SAYGLRENPK KTWRAVDSRA PLPQDKVCKQ CGKGFQSMKA LCGHMACHSD KERGVFKDDN  120
CSWTSESRKI VVDGHSDTEE AEEVRTTRSS LSKSSARYKK LVDNSSFNLG NNNGSSSVTE  180
IDGVDQEEVA MCLMMLSKDS GCNKGGGGGG VNSVVESSDN NSVVLETKSS SIEMIIGRKE  240
SVSYGHNQNE ASQIKKLNAT SFGEEIEKTE NSDSGYFLDE CAKAESDVSV DGFRRYGGFG  300
EFKKSSKLIK NEYADGDDYD DDNGVMASNL VARTDQSRKR KYGSENPEPR NGSPKKSKYE  360
CFNCKKVFKS YQALGGHRPC HKRVNEFQES RYESVRNSQE DSTNYKKLVE PSSSKKPSAK  420
KLATSHNAEK KNKAKKSKGH VCPFCDRVFK NGQALGGHKR SHFIGGHDEN YINRSPVEKK  480
TEQQSDLLDL NLPAPEADED YERGQFFSW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01205.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847770.10.0PREDICTED: uncharacterized protein LOC105967696
TrEMBLA0A022QLL50.0A0A022QLL5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.16e-38C2H2-like zinc finger protein