PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01262.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 238aa    MW: 27063.5 Da    PI: 7.8577
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01262.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.5e-0913372248
                      T-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqkyl 48
                      g W++Ia++++ +Rt++++k++w+++l
  Migut.L01262.1.p 13 G-WSAIASHLP-KRTDNEIKNYWNTHL 37
                      5.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.892141IPR017930Myb domain
CDDcd001675.45E-7637No hitNo description
SuperFamilySSF466892.18E-81049IPR009057Homeodomain-like
PfamPF002498.9E-81237IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.2E-131351IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MVPSMLHPVK NTGWSAIASH LPKRTDNEIK NYWNTHLKKR LTKMGIDPTT HKPMSHALIS  60
QPKDLSHMAQ WETARLEAES RIVRESKLAL SNPNPNPNYY NYHYHYYNKT ATAAAAPPPP  120
PPPPPPRPPC LDILKVWQGM TWTNPRKDHT MVNNNNNNNR GFTADHGMLM ANYTPAPPLS  180
DGLTIHESAF LNDGRETSHE DDQQIKEVIF FEDNKVTDYW SNILNVVNSS IDLHHCF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01262.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2022700.0HQ202270.1 Mimulus guttatus isolate A pop-variant IM62 MYB transcription factor MIXTA-like 3 protein (MYBML3) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847600.11e-144PREDICTED: uncharacterized protein LOC105967546
TrEMBLA0A022QJ891e-145A0A022QJ89_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.11e-32myb domain protein 106