PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.L01368.2.p

Common Name

LOC105967654, MIMGU_mgv1a012143mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 233aa MW: 25272.1 Da PI: 6.7949

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.L01368.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.6	7e-11	145	192	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq Migut.L01368.2.p 145 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 192 8***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.28E-18	139	209	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	9.82E-11	139	196	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.3E-18	141	209	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.828	141	191	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.0E-8	145	192	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.0E-10	147	197	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence Send to blast
MDPQGAAMMN DGGVYNFAEI WPGFQMNAAA ASYGLGLDPM LVDQRSNNSP PNHNSRKRRD 60 EEDDCAKGGA ASTSNSNGNS NNNNFMQNEV DYKRMKSVGS NGNYENKAEG EGNSGKAGEA 120 PVKPAEPPKQ DFIHVRARRG QATDSHSLAE RARREKISER MKILQDLVPG CNKVIGKALV 180 LDEIINYIQS LQRQVEFLSM KLEAVNARVG LDGFPSKDVS APNTTPNFLN VG*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269\|PubMed:23715469}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.L01368.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP257519	3e-95	KP257519.1 Salvia miltiorrhiza clone 86 basic helix-loop-helix transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012847721.1	1e-162	PREDICTED: transcription factor bHLH79-like isoform X1
Swissprot	Q69WS3	2e-58	BH094_ORYSJ; Transcription factor BHLH094
TrEMBL	A0A022QN13	1e-161	A0A022QN13_ERYGU; Uncharacterized protein
STRING	Migut.L01368.1.p	1e-162	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59640.2	1e-52	BIG PETAL P

Link Out ? help Back to Top
Phytozome	Migut.L01368.2.p
Entrez Gene	105967654