PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01368.3.p
Common NameLOC105967654, MIMGU_mgv1a012143mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 200aa    MW: 21834.1 Da    PI: 6.5233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01368.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.4e-11145192455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Migut.L01368.3.p 145 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 192
                       8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-16139197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.45E-10139196No hitNo description
Gene3DG3DSA:4.10.280.105.0E-16141196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828141191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-8145192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.0E-11147197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MDPQGAAMMN DGGVYNFAEI WPGFQMNAAA ASYGLGLDPM LVDQRSNNSP PNHNSRKRRD  60
EEDDCAKGGA ASTSNSNGNS NNNNFMQNEV DYKRMKSVGS NGNYENKAEG EGNSGKAGEA  120
PVKPAEPPKQ DFIHVRARRG QATDSHSLAE RARREKISER MKILQDLVPG CNKVIGKALV  180
LDEIINYIQS LQRQVEVDH*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01368.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2575191e-72KP257519.1 Salvia miltiorrhiza clone 86 basic helix-loop-helix transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847721.11e-143PREDICTED: transcription factor bHLH79-like isoform X1
RefseqXP_012847722.11e-144PREDICTED: transcription factor BPE-like isoform X2
SwissprotQ69WS33e-47BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A022QN131e-142A0A022QN13_ERYGU; Uncharacterized protein
STRINGMigut.L01368.1.p1e-143(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-42BIG PETAL P