PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01453.1.p
Common NameLOC105966537, MIMGU_mgv1a019173mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 252aa    MW: 27864.7 Da    PI: 9.4622
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01453.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.000386890123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C++C k+F ++  L  H++ H
  Migut.L01453.1.p 68 FECQYCLKVFGNSQALGGHQNAH 90
                      89*****************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.8E-46494IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576672.35E-66495No hitNo description
PfamPF139122.4E-66892IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.1986895IPR007087Zinc finger, C2H2
PROSITE patternPS0002807090IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MEINSLTSEK KIKLFGIELE PEPVKNQEKG LPERGESVNS SASSTVTVSP GPTGGDVAAD  60
GGGGKKKFEC QYCLKVFGNS QALGGHQNAH KKERMRKKRL QLQARKATIN SYIQPFRNYY  120
NVFNNSRACS FNGSNSRNSN SNSNSNNNNS AWFYDPSSHH EFTMCYEESQ ISFGAYGSDP  180
NMDRSPEDSR WYEPFDRQDR TTPAFYLTHA ADASKDNNKG SSSSLSSLKK KNCSRKSSLD  240
LKLGLSLHST I*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01453.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825620.0AC182562.2 Erythranthe guttata clone MGBa-38M20, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846551.10.0PREDICTED: zinc finger protein 5
TrEMBLA0A022QP130.0A0A022QP13_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51362130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.12e-12zinc finger protein 5