PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01553.1.p
Common NameLOC105968010, MIMGU_mgv1a008605mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRF
Protein Properties Length: 369aa    MW: 42331.5 Da    PI: 9.0817
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01553.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC79.53.2e-25119162144
               WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                       d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e
  Migut.L01553.1.p 119 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 162
                       79***************************************998 PP
2QLQ51.13.9e-184477235
               QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35
                      +FT +Q+q+L++Q+l++Ky+++++++P++Ll+ i
  Migut.L01553.1.p 44 PFTTSQWQELEHQALVFKYMISGLQIPQDLLFTI 77
                      8*****************************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.9E-84379IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166619.8664479IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.4E-134477IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.762119163IPR014977WRC domain
PfamPF088793.4E-21120162IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MYRRRFCYTN GCSEINIPTL LKTIYSNQIP NTLSLSLSLK NMFPFTTSQW QELEHQALVF  60
KYMISGLQIP QDLLFTITTS FHSSLSSKLL HHPPPPQHMI GWNGYQYEQQ MGYGHRKIDP  120
EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGRNRSRKP VESITLSSKP PTNINNNNNT  180
AIPTTNNYSS SSSSSSSSSA QSHFLYPHNT PSSSSRPGAT KFFMESNPYR NRNGPETDEH  240
PFFSSGINSS SNGVSESASW QLSQMKQSNA YNSSGLESWQ QQLQSLTRQQ NHHDHFNNNN  300
YSSCNNHVRR PLSNDDRDEE DNHQPKKVMH HFLDSWPDSE HHQLSNNNKT HLSASAPNSL  360
HDFFMTEK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01553.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754462e-44HG975446.1 Solanum pennellii chromosome ch07, complete genome.
GenBankHG9755192e-44HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848051.10.0PREDICTED: growth-regulating factor 5-like
RefseqXP_012848052.10.0PREDICTED: growth-regulating factor 5-like
TrEMBLA0A022QPC30.0A0A022QPC3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7432384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.13e-42growth-regulating factor 5