PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.L01692.1.p

Common Name

MIMGU_mgv1a021669mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 219aa MW: 23459.3 Da PI: 6.9523

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.L01692.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	86.7	5.3e-27	61	138	6	83
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 + ++h+k +g +RRvR++a+ aar+F+L++eLG +d+ t+eWLl+qa+p+i+++tgt+ ++++++++s+ ++ Migut.L01692.1.p 61 PSARDRHAKINGCGRRVRIPALAAARIFQLTRELGNRSDGDTVEWLLRQAEPSIIAATGTGIVPEESVSNSSRAAATT 138 56789*******************************************************999885554333333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	4.3E-23	62	135	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	20.575	63	117	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence Send to blast
GWPTNSNNPN NSLMLVKPMH CSDMVSHSDN HHSPPPDLPH FVPPPPTSAN HNLRKSAAGG 60 PSARDRHAKI NGCGRRVRIP ALAAARIFQL TRELGNRSDG DTVEWLLRQA EPSIIAATGT 120 GIVPEESVSN SSRAAATTTT AVTYPPIAAP ISVALPPPEP NCRLDLFQPQ PQPSNPAMAL 180 DFSLNGYHQT PPFMALLLQP ATADTEVDSY RRAAEDYQ*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.L01692.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012835809.1	1e-140	PREDICTED: transcription factor PCF1
TrEMBL	A0A022RI31	1e-158	A0A022RI31_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.L01692.1.p	1e-159	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA248	24	201

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	5e-33	TCP family protein

Link Out ? help Back to Top
Phytozome	Migut.L01692.1.p