PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01740.1.p
Common NameMIMGU_mgv1a023816mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 251aa    MW: 29180.8 Da    PI: 5.1996
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01740.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.94.1e-1988140456
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       + ++++eqle Le+ F+++ ++  e++ +L+k+lgL+ rq+ vWFqNrRa++k
  Migut.L01740.1.p  88 KKRLSNEQLELLENSFQEDIKLEPEKKMKLSKELGLQPRQIAVWFQNRRARWK 140
                       5569************************************************9 PP
2HD-ZIP_I/II119.32.1e-3887178293
       HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                       kk+rls+eq++lLE+sF+e+ kLepe+K++l++eLglqprq+avWFqnrRAR+k+kqlE+ y+aL+++yda+++++++L++ev +Lr+ lke
  Migut.L01740.1.p  87 KKKRLSNEQLELLENSFQEDIKLEPEKKMKLSKELGLQPRQIAVWFQNRRARWKAKQLERLYDALQQEYDAVSRDKQKLQQEVMALRAILKE 178
                       9**************************************************************************************88875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.90882142IPR001356Homeobox domain
SuperFamilySSF466899.84E-1984152IPR009057Homeodomain-like
SMARTSM003895.4E-1785146IPR001356Homeobox domain
CDDcd000862.02E-1687143No hitNo description
PfamPF000462.5E-1688140IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.607.1E-2089149IPR009057Homeodomain-like
PRINTSPR000315.4E-5113122IPR000047Helix-turn-helix motif
PROSITE patternPS000270117140IPR017970Homeobox, conserved site
PRINTSPR000315.4E-5122138IPR000047Helix-turn-helix motif
PfamPF021838.0E-8142176IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDWNGNYVCR VPFVSRPAVD NSLSFLYNYN YDQHFPPEMK QQAAITDHEQ ALMMQPNLTM  60
EKNNNNNHNN ISMMNNYNTG LDINDPKKKR LSNEQLELLE NSFQEDIKLE PEKKMKLSKE  120
LGLQPRQIAV WFQNRRARWK AKQLERLYDA LQQEYDAVSR DKQKLQQEVM ALRAILKENQ  180
VGKNKEVSIE ISGEETVEST SLIPIINNSN ELHDQIAECS YPLKVDDYYN NNNTTVIMPP  240
PPYWPASSPN *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134142RRARWKAKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01740.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836076.10.0PREDICTED: putative homeobox-leucine zipper protein ATHB-51 isoform X1
TrEMBLA0A022RDZ91e-170A0A022RDZ9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38692246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.19e-37homeobox 51