PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01740.2.p
Common NameMIMGU_mgv1a023816mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 242aa    MW: 28179.7 Da    PI: 5.1849
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01740.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox603.9e-1979131456
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       + ++++eqle Le+ F+++ ++  e++ +L+k+lgL+ rq+ vWFqNrRa++k
  Migut.L01740.2.p  79 KKRLSNEQLELLENSFQEDIKLEPEKKMKLSKELGLQPRQIAVWFQNRRARWK 131
                       5569************************************************9 PP
2HD-ZIP_I/II119.41.9e-3878169293
       HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                       kk+rls+eq++lLE+sF+e+ kLepe+K++l++eLglqprq+avWFqnrRAR+k+kqlE+ y+aL+++yda+++++++L++ev +Lr+ lke
  Migut.L01740.2.p  78 KKKRLSNEQLELLENSFQEDIKLEPEKKMKLSKELGLQPRQIAVWFQNRRARWKAKQLERLYDALQQEYDAVSRDKQKLQQEVMALRAILKE 169
                       9**************************************************************************************88875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.90873133IPR001356Homeobox domain
SuperFamilySSF466899.41E-1975143IPR009057Homeodomain-like
SMARTSM003895.4E-1776137IPR001356Homeobox domain
CDDcd000861.41E-1678134No hitNo description
PfamPF000462.3E-1679131IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.6E-2080140IPR009057Homeodomain-like
PRINTSPR000315.1E-5104113IPR000047Helix-turn-helix motif
PROSITE patternPS000270108131IPR017970Homeobox, conserved site
PRINTSPR000315.1E-5113129IPR000047Helix-turn-helix motif
PfamPF021837.6E-8133167IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MDWNGNYVCR VPFVSRPAVD NSLSFLYNYN YDQHFPPDHE QALMMQPNLT MEKNNNNNHN  60
NISMMNNYNT GLDINDPKKK RLSNEQLELL ENSFQEDIKL EPEKKMKLSK ELGLQPRQIA  120
VWFQNRRARW KAKQLERLYD ALQQEYDAVS RDKQKLQQEV MALRAILKEN QVGKNKEVSI  180
EISGEETVES TSLIPIINNS NELHDQIAEC SYPLKVDDYY NNNNTTVIMP PPPYWPASSP  240
N*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125133RRARWKAKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01740.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836077.11e-179PREDICTED: putative homeobox-leucine zipper protein ATHB-51 isoform X2
TrEMBLA0A022RDZ91e-162A0A022RDZ9_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.11e-36homeobox 51