PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01801.1.p
Common NameMIMGU_mgv1a019349mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 253aa    MW: 28215 Da    PI: 5.1099
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01801.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM138.54.1e-43141472128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        pG+rF Pt+eelv++yL++k++g++ ++++vi+ v+iy+++PwdLpk       a+ ++w+fFs+r++++ +g r+nr+t++gyWkatg+  
  Migut.L01801.1.p  14 LPGYRFYPTQEELVSFYLQNKLNGTRPDVHTVIPVVNIYDHNPWDLPKfggeFSPADGEQWFFFSPRQEREYRGGRPNRMTNAGYWKATGSPS 106
                       69***************************999***************656643334788********************************** PP

               NAM  91 evlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +v+s     +  +g+k+t+vfy grap+g+kt+W m+ey++
  Migut.L01801.1.p 107 NVYSIinnCSVIIGMKRTMVFYLGRAPNGTKTTWKMNEYKA 147
                       999877667788***************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-4513181IPR003441NAC domain
PROSITE profilePS5100546.98113183IPR003441NAC domain
PfamPF023653.5E-2315146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDIIDDDDEV GTILPGYRFY PTQEELVSFY LQNKLNGTRP DVHTVIPVVN IYDHNPWDLP  60
KFGGEFSPAD GEQWFFFSPR QEREYRGGRP NRMTNAGYWK ATGSPSNVYS IINNCSVIIG  120
MKRTMVFYLG RAPNGTKTTW KMNEYKAVDY SNCEPSIHNS SSSTNVADPQ LREEVSLCRI  180
YTGSRSIRAF DRRPTSEPAA EAVHHHSSGG SSSSSSSPPA AAQNINTATD QNSEGGGEPC  240
WDADQLFNWF FT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-321518619168NO APICAL MERISTEM PROTEIN
1ut4_B3e-321518619168NO APICAL MERISTEM PROTEIN
1ut7_A3e-321518619168NO APICAL MERISTEM PROTEIN
1ut7_B3e-321518619168NO APICAL MERISTEM PROTEIN
3swm_A3e-321518622171NAC domain-containing protein 19
3swm_B3e-321518622171NAC domain-containing protein 19
3swm_C3e-321518622171NAC domain-containing protein 19
3swm_D3e-321518622171NAC domain-containing protein 19
3swp_A3e-321518622171NAC domain-containing protein 19
3swp_B3e-321518622171NAC domain-containing protein 19
3swp_C3e-321518622171NAC domain-containing protein 19
3swp_D3e-321518622171NAC domain-containing protein 19
4dul_A3e-321518619168NAC domain-containing protein 19
4dul_B3e-321518619168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01801.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835820.11e-89PREDICTED: NAC domain-containing protein 90-like
TrEMBLA0A022RFU80.0A0A022RFU8_ERYGU; Uncharacterized protein
STRINGMigut.L01801.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24942357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-65NAC domain containing protein 90