PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01878.1.p
Common NameMIMGU_mgv1a022559mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 228aa    MW: 25721.1 Da    PI: 5.0418
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01878.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.4e-132873555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      + + Er+RR+++N+ +  Lr+++P+      +K++Ka++++ A+eYIk Lq
  Migut.L01878.1.p 28 NIASERKRRKKLNETLYALRSVVPNI-----TKMDKASTVRDAIEYIKLLQ 73
                      5578*********************7.....7****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.5072372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-172590IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.92E-132677No hitNo description
PfamPF000102.6E-112873IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-152988IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-142978IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MKYTCGCSYF EYESSSPEGT HVSSASKNIA SERKRRKKLN ETLYALRSVV PNITKMDKAS  60
TVRDAIEYIK LLQDEERIIQ SQISEMESII SMSSLLPNNN NNNNINNIEN DDQEAETYFC  120
MPKKRARMEF SDESNPIEVL ELSISSMGEK NVMVSLTCSN RRDTIIKLCE AFESLNLKII  180
TSTINHFSGK LFKTVFIQSD EEEKDVLRVN IEAAIAALNN PHSPISS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13138ERKRRKKL
2121127PKKRARM
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01878.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828748.12e-82PREDICTED: transcription factor bHLH35
TrEMBLA0A022RIK61e-164A0A022RIK6_ERYGU; Uncharacterized protein
STRINGMigut.L01878.1.p1e-164(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29232451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.13e-60bHLH family protein