PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01896.1.p
Common NameLOC105956529, MIMGU_mgv1a021962mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 282aa    MW: 31310.6 Da    PI: 4.7137
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01896.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.17.3e-161048240
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                       i+n+s+r+ t+ kR  g+ KKA+ELSvLC++++a+++ 
  Migut.L01896.1.p 10 LISNESKRNATLLKRTDGLVKKANELSVLCGVDIAIVVH 48
                      59**********************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006616.764152IPR002100Transcription factor, MADS-box
SMARTSM004321.3E-10167IPR002100Transcription factor, MADS-box
CDDcd002663.84E-17287No hitNo description
SuperFamilySSF554555.76E-19299IPR002100Transcription factor, MADS-box
PRINTSPR004049.9E-9323IPR002100Transcription factor, MADS-box
PfamPF003191.2E-151148IPR002100Transcription factor, MADS-box
PRINTSPR004049.9E-92338IPR002100Transcription factor, MADS-box
PRINTSPR004049.9E-93859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MTRKRITHEL ISNESKRNAT LLKRTDGLVK KANELSVLCG VDIAIVVHKN LGGGVVEDNA  60
VLWPSPSMFR ERLHRFFNFT NFERSKRKIV HERYMDQRIN EEMECLSKLK RRVEIGESQQ  120
MVVNIGRREE LYKKYLDEVD LFQLEELNSV ADEMLEELDE LELPLYPPPP PPPPPPPPPP  180
PPLFFYSGDR KEQIMGGGGG GGEASALEFE LGIDNLKNEQ WFIDVMSDEQ AAPPPPPPPL  240
PYTGGAAGNC AAGERTERSV GGVDVPAAAT PIKESATETP Q*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01896.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835831.10.0PREDICTED: agamous-like MADS-box protein AGL80
TrEMBLA0A022REW60.0A0A022REW6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37820129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.26e-18M-type_MADS family protein