PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.L02020.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Trihelix

Protein Properties

Length: 314aa MW: 36605.6 Da PI: 8.1397

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.L02020.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.2	4.4e-23	39	122	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++L+ +r +++ ++ ++k+kk lWe +s +m+++g +r+p qCk+kw+nl +ryk ++++++ + +++++p++++++ Migut.L02020.1.p 39 QWSIHETRDLLMFRADLDPNFMETKRKKLLWELISTRMKDKGHNRNPLQCKCKWKNLVTRYKGCETTDEA--EVVRQQFPFYNEMQ 122 7*****************************************************************98..577889****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd12203	1.93E-22	38	103	No hit	No description
Pfam	PF13837	2.7E-18	39	123	No hit	No description
PROSITE profile	PS50090	6.806	40	96	IPR017877	Myb-like domain

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MDHGQWSQLH HSPSYAAAAG DFVMSSINDT GGGGDRFPQW SIHETRDLLM FRADLDPNFM 60 ETKRKKLLWE LISTRMKDKG HNRNPLQCKC KWKNLVTRYK GCETTDEAEV VRQQFPFYNE 120 MQTIFSARMQ RTMWLEAGGG GGASSSKKKG VVHHQFSSDE DDDLENEDIS IQGEKKGRGA 180 KRKRKTVMKG RTASSCGGEL GNSIVNGVRE MMEDFMKHEM EIEIQWLKCN EEREEKRRVK 240 EMEWRQTMEV LQNERMMIET RWRENEEERK IREEIRSEKR DALITALLNK LSTTQEGSFR 300 FKSVILVKYM LCE*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.L02020.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012850212.1	0.0	PREDICTED: trihelix transcription factor GT-3b
TrEMBL	A0A022QDA6	0.0	A0A022QDA6_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.L02020.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4187	23	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	4e-49	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Migut.L02020.1.p