PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L02034.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 178aa    MW: 19940.9 Da    PI: 5.9266
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L02034.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.4e-115092855
                      HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      + r+RR+ri ++f  L++l+P        K++ +++Le+A++Y+k Lq
  Migut.L02034.1.p 50 AARQRRHRISERFKILQSLVPGG-----SKMDTVSMLEEAIQYVKFLQ 92
                      569******************95.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.0564291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-1547100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.8E-134897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.89E-144895No hitNo description
SMARTSM003532.4E-144897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-85192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MDSYSSLSNP SSCESSSVIA AAAAKEKEKE KKKNKGNGGG KLSTDPQSVA ARQRRHRISE  60
RFKILQSLVP GGSKMDTVSM LEEAIQYVKF LQNQIWLHHS MIDNITTTTT LNADPTNYNL  120
TVINNNNINN CSSSLLINDN NDNDDLHLPF DEDNYNYSSW EDEMYGAARR SDHHYYS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L02034.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018859333.15e-41PREDICTED: transcription factor bHLH140-like
TrEMBLA0A022QGG52e-52A0A022QGG5_ERYGU; Uncharacterized protein
STRINGMigut.L02034.1.p1e-130(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117141723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.12e-28APRATAXIN-like