PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00241.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 268aa    MW: 29112.2 Da    PI: 5.9095
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00241.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.1e-3073130359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY+ eHnh+
  Migut.M00241.1.p  73 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTTLLITYSCEHNHP 130
                       99************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.6E-3163132IPR003657WRKY domain
SuperFamilySSF1182908.76E-2665132IPR003657WRKY domain
PROSITE profilePS5081131.66366132IPR003657WRKY domain
SMARTSM007749.8E-3571131IPR003657WRKY domain
PfamPF031064.6E-2573130IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MESRFDHVHE EESTTPPENT ADSPLSGDEP ADQETYAPLA KKSKRGAHKK VVTVPIGDAD  60
GFRSRGEVYP PPDSWSWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSRLDPTTLL  120
ITYSCEHNHP LPTTTKNHHH HHSLAAVAAA KSTSRSSSTT TTTTIDPPAN FPPEECAAFA  180
NQPDIEPADN GFVELAGEFG WLCDVGSTMM DGTTLVGPTW AHGDHAEVLM PIGEEDKVLF  240
GDLGDLPEYS VVFRRCRSET PCCGGTG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-2049133680Disease resistance protein RRS1
5w3x_D2e-2049133680Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00241.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837543.10.0PREDICTED: probable WRKY transcription factor 69
TrEMBLA0A2G9HZX01e-139A0A2G9HZX0_9LAMI; Uncharacterized protein
STRINGMigut.M00241.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74682232
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.12e-59WRKY DNA-binding protein 69