PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00256.1.p
Common NameLOC105953781, MIMGU_mgv1a026524mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 258aa    MW: 28403.1 Da    PI: 6.1532
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00256.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.51.8e-115399354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r+h+ +ErrRR+riN  +++Lr+l+P        K++Ka+ L ++v+ +k+L
  Migut.M00256.1.p 53 RNHSLAERRRRERINAHLATLRTLIPGT-----VKMDKAALLGEVVNRVKEL 99
                      58*************************8.....7************999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.2125099IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-95399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.66E-1053101No hitNo description
Gene3DG3DSA:4.10.280.103.3E-1353101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.3E-1254102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-1056105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.21E-6151220No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MEYFKINVDD GICDNYSSKL VLDNERGELV RAAVVKSGRA KVGNADKALV ALRNHSLAER  60
RRRERINAHL ATLRTLIPGT VKMDKAALLG EVVNRVKELR RSMVEATNGA LVPTEVDEVI  120
VEQHKDENPN NCKPSSVSIR ASLCCDFTHE LLSDLRQALD ETLPLNANIT RAEIATMGSR  180
MVNVFLISGQ NDATNNAEDI GDQESQLLIT SVRQALLSVL DKYYASEEFS SGNIVPTKRR  240
RVSPFDSSSS SSLGDMW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15863ERRRRE
2237241KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00256.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832914.10.0PREDICTED: transcription factor bHLH30-like
TrEMBLA0A022RMF90.0A0A022RMF9_ERYGU; Uncharacterized protein
STRINGMigut.M00256.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA119892123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-27bHLH family protein