PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00262.1.p
Common NameLOC105953803, MIMGU_mgv1a008379mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 376aa    MW: 42741.6 Da    PI: 8.4356
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00262.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.69.3e-1557147186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W+++ +++Li+a      +l+rg+l++++W++v++++     ++ +++r+ +qCk++++  +k+yk +k   ++ + + +st+p+f++l+
  Migut.M00262.1.p  57 CWSEEATRTLIDAWGAHYLDLNRGNLRQKHWQAVADAVnalhgASFKLRRTDIQCKNRIDTTKKKYKIEKSKVSQSNGRYVSTWPHFQSLD 147
                       7*************************************999999999***********************99999999999*******997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.6E-2455149No hitNo description
Gene3DG3DSA:1.10.10.600.00158121IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MSSQPTPSPP PSSTTDPQIS DDDDRLAPPS PGKREVSSEP PPTATRTTPV FPSREDCWSE  60
EATRTLIDAW GAHYLDLNRG NLRQKHWQAV ADAVNALHGA SFKLRRTDIQ CKNRIDTTKK  120
KYKIEKSKVS QSNGRYVSTW PHFQSLDSLI GDSFSKTTAT TSHTRNLRRR VSPSPEFSPS  180
PSEPPIHRRK NSPARRDHPE KDPAPSQTLR IPWSVPVGPR SKRTGPGSVT ERNFSVMAAA  240
AAAMEAEELY EKEEEDEEED DYNNELDDYE ECGRRRRQPL LPEVGMKRKR KEAVEDEAAV  300
AEDGYRSLAE AIARLGEIYK KVEEAKQRQM VEMEKQRMQF AKDLEIQRMK VFMESQVHLE  360
KLKRNSKHNS QSSYL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1274290RRRQPLLPEVGMKRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00262.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832936.10.0PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A022RMF30.0A0A022RMF3_ERYGU; Uncharacterized protein
STRINGMigut.M00262.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.11e-36sequence-specific DNA binding transcription factors