PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M00292.1.p

Common Name

MIMGU_mgv1a025903mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 217aa MW: 24736.9 Da PI: 6.6258

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M00292.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.2	3.3e-09	21	69	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 ++ E++RR++++ f++L +llP+ ++ l + +AveYIks+ Migut.M00292.1.p 21 RKITEKNRRNQMKLLFSNLTSLLPHhT---SKVEgLPVPDQIDEAVEYIKSM 69 6799*******************55...66666*************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.96E-9	9	78	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	11.363	16	69	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.24E-5	18	74	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.6E-8	18	82	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.2E-5	21	69	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0019	22	75	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MEKQARYCSP NSSSSAPRIE RKITEKNRRN QMKLLFSNLT SLLPHHTSKV EGLPVPDQID 60 EAVEYIKSMK TKLEEMSRKD SLKLPRKEYC DQDQTTTSIE KTPLVEVHNM GPNIDVVLAK 120 GLKDFSTFHD IIRMLHRHEV EVASATFARC GNSTIQILQD NNNNNKDGQC RLDFGGEEIL 180 RKVEELVCGA NSSTEIHSQS NLWDYEIESN IYLRIN*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M00292.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012852410.1	1e-137	PREDICTED: uncharacterized protein LOC105972020
TrEMBL	A0A022QBC1	1e-160	A0A022QBC1_ERYGU; Uncharacterized protein
STRING	Migut.M00292.1.p	1e-161	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5297	14	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	4e-16	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.M00292.1.p