PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00367.1.p
Common NameMIMGU_mgv1a018138mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 233aa    MW: 26915.1 Da    PI: 5.6613
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00367.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-151461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd +l  +++++G ++W++ +   g+ R++k+c++rw +yl
  Migut.M00367.1.p 14 KGAWSEEEDNKLRAYIRRYGHPNWRLLPVFAGLARCGKSCRLRWVNYL 61
                      79********************************************97 PP
2Myb_DNA-binding56.85.2e-1867110146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rgr+T++E++l+++++ qlG++ W++Ia++++ gRt++++k++w+ 
  Migut.M00367.1.p  67 RGRFTEDEEDLIIKLHDQLGTK-WSAIAAKLP-GRTDNEVKNYWHA 110
                       89********************.*********.***********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.6E-22564IPR009057Homeodomain-like
PROSITE profilePS5129414.655961IPR017930Myb domain
SuperFamilySSF466892.71E-2911108IPR009057Homeodomain-like
SMARTSM007177.2E-121363IPR001005SANT/Myb domain
PfamPF002491.0E-131461IPR001005SANT/Myb domain
CDDcd001675.65E-91661No hitNo description
PROSITE profilePS5129424.34562116IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-2465115IPR009057Homeodomain-like
SMARTSM007172.2E-1566114IPR001005SANT/Myb domain
PfamPF002495.2E-1667110IPR001005SANT/Myb domain
CDDcd001674.18E-1069112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MVRPPCFDKN GMKKGAWSEE EDNKLRAYIR RYGHPNWRLL PVFAGLARCG KSCRLRWVNY  60
LKPGLKRGRF TEDEEDLIIK LHDQLGTKWS AIAAKLPGRT DNEVKNYWHA HINKRNKRNG  120
TITKVMHGNQ SMSELEEHVS EDVFGKDLSV ENPKNFDDLD TFVDSFLADK VSEEETRDFG  180
LIHQEMQNVN KPTCSDSSDS SITTSWGSNE ESRENFWSEP ILEDDTFDMV LW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A6e-24121155107B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in salt stress response. Confers tolerance to salt stress (PubMed:22575450). Involved in distinct cellular processes in response to osmotic stress, including control of primary metabolism and negative regulation of short-term transcriptional responses to osmotic stress (PubMed:19211694). Can activate the steps necessary for aliphatic suberin synthesis and deposition of cell wall-associated suberin-like lamellae. Involved in the production of aliphatic suberin under abiotic stress conditions (PubMed:25060192). {ECO:0000269|PubMed:19211694, ECO:0000269|PubMed:22575450, ECO:0000269|PubMed:25060192}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00367.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress (PubMed:19211694, PubMed:25060192). Induced by osmotic stress (PubMed:19211694). Induced by abscisic acid (PubMed:25060192). {ECO:0000269|PubMed:19211694, ECO:0000269|PubMed:25060192}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852361.11e-160PREDICTED: transcription factor MYB32-like
SwissprotQ9M0J53e-53MYB41_ARATH; Transcription factor MYB41
TrEMBLA0A022Q8371e-156A0A022Q837_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-55myb domain protein 14
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]