PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00409.1.p
Common NameLOC105972042, MIMGU_mgv1a015917mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 142aa    MW: 16322.3 Da    PI: 4.9717
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00409.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.4e-0884123445
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       ++ +E+ l  +  ++ G + W++Ia +++ gR ++++  +w+
  Migut.M00409.1.p  84 FSLDEETLVTRMYNLVGER-WSLIAGRIP-GRNAEEIEKYWN 123
                       899**************99.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.63276126IPR017877Myb-like domain
SMARTSM007178.8E-780128IPR001005SANT/Myb domain
SuperFamilySSF466894.32E-782124IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.6E-1183124IPR009057Homeodomain-like
CDDcd001672.82E-683123No hitNo description
PfamPF002491.9E-683124IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MQSSFFLANS SYIYILHTHA YTYTYIYTYI DRSITARFLK TVETLMEDDQ ILPKSTTADR  60
DAVVGLDVVA AENTSRQDSK QVEFSLDEET LVTRMYNLVG ERWSLIAGRI PGRNAEEIEK  120
YWNSKHSTCS EIKKPELTYL N*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00409.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852430.11e-102PREDICTED: uncharacterized protein LOC105972042
TrEMBLA0A022QE421e-100A0A022QE42_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA65791932
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.14e-18MYB_related family protein