PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M00569.1.p

Common Name

LOC105965898, MIMGU_mgv1a010586mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Nin-like

Protein Properties

Length: 309aa MW: 33899.1 Da PI: 8.5889

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M00569.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	58.2	1.6e-18	43	88	6	51
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 s++++s+ Fslp+ AA +Lgvc+TvLK+ C +G+ RWP+Rki s Migut.M00569.1.p 43 SFDEVSNLFSLPLSYAADSLGVCPTVLKKLCYDNGLVRWPYRKILS 88 799****************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.049	21	110	IPR003035	RWP-RK domain
Pfam	PF02042	2.0E-16	44	87	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MSTAPQNPTQ NNQSPIPISS PASIIPNRNP TPNPPSHALK SPSFDEVSNL FSLPLSYAAD 60 SLGVCPTVLK KLCYDNGLVR WPYRKILSGK SIEEIKKDAA IEKEKNLAEL KVYGERNNSL 120 ARSAALSPSG PQPQSTNTIS PQESSTVRIL PQQPNKDNQI QSSQIMKIGN STISDEFKYG 180 FPSDGLSSVS YRWWGNKSGG ENVVDTLQRV DENADERKEQ HEGKVDHAAN LSSMDDEVMT 240 QGKKNDEPVG LLSVLRKKAA KDGLQALKLG VYRGYSDGKN LDRTKKMMLV QIFKSSLPSE 300 WGDMYSES*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M00569.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012845898.1	0.0	PREDICTED: uncharacterized protein LOC105965898 isoform X1
TrEMBL	A0A022QUT4	0.0	A0A022QUT4_ERYGU; Uncharacterized protein
STRING	Migut.M00569.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10744	19	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	4e-09	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Migut.M00569.1.p
Entrez Gene	105965898