PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01083.1.p
Common NameMIMGU_mgv1a0222731mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 193aa    MW: 21909.6 Da    PI: 6.5316
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01083.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.7e-20123174255
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrd  ++ g  +r++lg+f taeeAa a+++a+++++g
  Migut.M01083.1.p 123 HYRGVRRRP-WGKYAAEIRDsRRKFG--ARVWLGTFETAEEAAMAYDEAALRIRG 174
                       8********.**********554443..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-29122183IPR001471AP2/ERF domain
CDDcd000186.84E-29122182No hitNo description
PROSITE profilePS5103223.261123182IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-21123183IPR016177DNA-binding domain
PfamPF008472.2E-15123174IPR001471AP2/ERF domain
SMARTSM003804.9E-33123188IPR001471AP2/ERF domain
PRINTSPR003671.7E-11124135IPR001471AP2/ERF domain
PRINTSPR003671.7E-11148164IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MAVDMQQSES SSSEAILENV WANFISKTNT HNDEESNMFE SSPKSWEKLP SFDREESIET  60
IILERLPSLG RWISMGAEAW EQHLDGIFLP TTTTKDNNIK TTEITADIHC TRKPGKVAAV  120
AKHYRGVRRR PWGKYAAEIR DSRRKFGARV WLGTFETAEE AAMAYDEAAL RIRGPNTYLN  180
FPLEKVVRTG ASL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-26119183164ATERF1
3gcc_A3e-26119183164ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01083.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848458.11e-137PREDICTED: ethylene-responsive transcription factor ERF091
TrEMBLA0A022QJC21e-135A0A022QJC2_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112371823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.15e-23ERF family protein