PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M01125.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 363aa MW: 39216.8 Da PI: 8.571

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M01125.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	5e-39	57	114	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknkk Migut.M01125.1.p 57 PHLKCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKKL 114 5789***************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.2E-33	58	113	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	8.0E-27	59	113	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.376	59	113	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	61	97	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence Send to blast
MTHQWPQNQN QIQQINDQKS MIDSSSAASV PNNNKVMEKT DPPPPPPPQQ QQLPPPPHLK 60 CPRCDSANTK FCYYNNYSLS QPRHFCKACK RYWTRGGTLR NVPVGGGCRK NKKLRRPSSS 120 AGGGSGGGIT TSAAKHSSAQ HHQQIDLSSS SSRPHASNYM MSNNNSNTSS FYPIELNFPF 180 SSYSTNSAAR VSSDNNNNTG AGLIFDLPQT HESSLGILGF SSGLNMAAAA IDEDYKNGGF 240 SRQLIQSSSG NNNYNSVLFG SSSSTMASLL ASTLEHQKFG ITDSSPHPIN NYDNEDNTHL 300 SINRWNPNIN NEQMMINNNS SDPAASSSSS LVWNTSSSNN NNVGSWFDPS NMAPSSSVPS 360 LI*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence Send to blast

MTHQWPQNQN QIQQINDQKS MIDSSSAASV PNNNKVMEKT DPPPPPPPQQ QQLPPPPHLK  60
CPRCDSANTK FCYYNNYSLS QPRHFCKACK RYWTRGGTLR NVPVGGGCRK NKKLRRPSSS  120
AGGGSGGGIT TSAAKHSSAQ HHQQIDLSSS SSRPHASNYM MSNNNSNTSS FYPIELNFPF  180
SSYSTNSAAR VSSDNNNNTG AGLIFDLPQT HESSLGILGF SSGLNMAAAA IDEDYKNGGF  240
SRQLIQSSSG NNNYNSVLFG SSSSTMASLL ASTLEHQKFG ITDSSPHPIN NYDNEDNTHL  300
SINRWNPNIN NEQMMINNNS SDPAASSSSS LVWNTSSSNN NNVGSWFDPS NMAPSSSVPS  360
LI*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M01125.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KR339304	2e-38	KR339304.1 Jasminum sambac microsatellite Js163 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012848585.1	0.0	PREDICTED: dof zinc finger protein DOF1.4
TrEMBL	A0A022QKA2	1e-157	A0A022QKA2_ERYGU; Uncharacterized protein
STRING	Migut.M01125.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	1e-34	Dof family protein

Link Out ? help Back to Top
Phytozome	Migut.M01125.1.p