PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01170.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 323aa    MW: 35634.6 Da    PI: 7.6226
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.62.1e-52131401128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelvv+yLkk++++ +l++  +i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+r++ky++g+r+nra++sgyWkatg+dk++l
  Migut.M01170.1.p  13 LPPGFRFHPTDEELVVHYLKKRAASAPLPV-AIIAELDLYKYDPWELPSKASFGEQEWYFFSRRERKYPNGERPNRAATSGYWKATGTDKPIL 104
                       79****************************.88***************988899*************************************** PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ + ++vg+kk Lvfy g+ pkg k++W+mheyrl
  Migut.M01170.1.p 105 TAnGAQTVGVKKALVFYGGKPPKGIKSNWIMHEYRL 140
                       9956778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-627175IPR003441NAC domain
PROSITE profilePS5100561.29513175IPR003441NAC domain
PfamPF023651.5E-2714140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MESNSAGNNH PRLPPGFRFH PTDEELVVHY LKKRAASAPL PVAIIAELDL YKYDPWELPS  60
KASFGEQEWY FFSRRERKYP NGERPNRAAT SGYWKATGTD KPILTANGAQ TVGVKKALVF  120
YGGKPPKGIK SNWIMHEYRL VDGNSAAKKT PGIAFIGNKT SSRLDDWVLC RIFKKSNSGT  180
TRPVEESMQS SPINNGYHNS IPAAMLSGNG FAIPGNPLRS DSFPEDVSLS SQYWNGMVIQ  240
PVAGNNGKPF PTSNNDEDDN MNPSSCSQIS DEDQHGNLSF ISLLNNYQQF SQTFQQNSSL  300
VHSQGEGNGI LDQSCQLPTS YF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-691317917169NO APICAL MERISTEM PROTEIN
1ut4_B4e-691317917169NO APICAL MERISTEM PROTEIN
1ut7_A4e-691317917169NO APICAL MERISTEM PROTEIN
1ut7_B4e-691317917169NO APICAL MERISTEM PROTEIN
3swm_A5e-691317920172NAC domain-containing protein 19
3swm_B5e-691317920172NAC domain-containing protein 19
3swm_C5e-691317920172NAC domain-containing protein 19
3swm_D5e-691317920172NAC domain-containing protein 19
3swp_A5e-691317920172NAC domain-containing protein 19
3swp_B5e-691317920172NAC domain-containing protein 19
3swp_C5e-691317920172NAC domain-containing protein 19
3swp_D5e-691317920172NAC domain-containing protein 19
4dul_A4e-691317917169NAC domain-containing protein 19
4dul_B4e-691317917169NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01170.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848590.10.0PREDICTED: NAC transcription factor 25
SwissprotQ8GY422e-94NAC25_ARATH; NAC transcription factor 25
TrEMBLA0A022QK710.0A0A022QK71_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.M01170.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18142466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-96NAC domain containing protein 25