PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01499.1.p
Common NameLOC105968520, MIMGU_mgv1a026788mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 339aa    MW: 38535.9 Da    PI: 4.8609
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01499.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.21.8e-5461331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtdeelv +yL +k++g  +el evi+ vd+yk+ePwdLp k  + +++ ewyf+s+rd+ky++g+r+nrat+sgyWkatgkd++
  Migut.M01499.1.p   6 LPPGFRFHPTDEELVAYYLDRKINGGIIEL-EVIPVVDLYKSEPWDLPeKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRSGYWKATGKDRS 97 
                       79***************************9.99**************95345556888*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       v s +++ vg+kktLv+y+grap+g +tdWvmheyrl
  Migut.M01499.1.p  98 VQS-QKRPVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 133
                       **9.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-622157IPR003441NAC domain
PROSITE profilePS5100559.9636157IPR003441NAC domain
PfamPF023653.9E-297133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MGAMTLPPGF RFHPTDEELV AYYLDRKING GIIELEVIPV VDLYKSEPWD LPEKSFLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATRSGYWK ATGKDRSVQS QKRPVGMKKT LVYYRGRAPH  120
GIRTDWVMHE YRLLDSALGT TGSNLKDSYA LCRVFKKNIV ITKTCRTKVP RGMMVDQVSW  180
DEDECGPTPE TSLREYADED AKGEIRSKNP NSEASSSELT QGTTTPMAAI GSSKYDPTAH  240
IAASDEVNSS MDDDHQFYFY GTENISNFIQ DYTGMFYDPY YPPLAMDDFP QVDLTEPKCS  300
SSEYMTNCDR LRDNGVNEIT ALEEIYSNLN YQNYGGSN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-55115812166NO APICAL MERISTEM PROTEIN
1ut4_B2e-55115812166NO APICAL MERISTEM PROTEIN
1ut7_A2e-55115812166NO APICAL MERISTEM PROTEIN
1ut7_B2e-55115812166NO APICAL MERISTEM PROTEIN
3swm_A3e-55115815169NAC domain-containing protein 19
3swm_B3e-55115815169NAC domain-containing protein 19
3swm_C3e-55115815169NAC domain-containing protein 19
3swm_D3e-55115815169NAC domain-containing protein 19
3swp_A3e-55115815169NAC domain-containing protein 19
3swp_B3e-55115815169NAC domain-containing protein 19
3swp_C3e-55115815169NAC domain-containing protein 19
3swp_D3e-55115815169NAC domain-containing protein 19
4dul_A2e-55115812166NAC domain-containing protein 19
4dul_B2e-55115812166NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00205DAPTransfer from AT1G54330Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01499.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848607.10.0PREDICTED: NAC domain-containing protein 86
TrEMBLA0A022QM930.0A0A022QM93_ERYGU; Uncharacterized protein
STRINGMigut.M01499.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46212442
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54330.11e-95NAC domain containing protein 20