PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01535.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 207aa    MW: 23182.1 Da    PI: 7.9865
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01535.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.71.8e-10721071148
                       HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        +++ +   G++ W++Ia++++ gRt++++k+ w+++l
  Migut.M01535.1.p  72 TIINMHSSIGNK-WSKIASCLP-GRTDNEIKNVWNTHL 107
                       678999999***.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-8749IPR009057Homeodomain-like
SuperFamilySSF466897.42E-1514103IPR009057Homeodomain-like
SMARTSM007174.3E-915109IPR001005SANT/Myb domain
PROSITE profilePS5129413.48957111IPR017930Myb domain
CDDcd001679.57E-671107No hitNo description
Gene3DG3DSA:1.10.10.601.5E-1671108IPR009057Homeodomain-like
PfamPF002491.2E-871107IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MGKGRAPCCD RSKVRTGPWS TAEDLRLTTF IQKNGHTNWR ALPKHAELQA EVAQSPKPKR  60
EKRTLLPRRR QTIINMHSSI GNKWSKIASC LPGRTDNEIK NVWNTHLKKR LLITANDNII  120
TEAEQAQSSS PCSSISSHST TGEDQEMGRV ENPGSTEVIT SSTQDDNRRE LVENIPADID  180
VDLWELLNSL DPLDINIMYA ENRVLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A6e-14171115105MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01535.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086359.18e-51transcription factor MYB63
TrEMBLA0A022QI031e-103A0A022QI03_ERYGU; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16490.19e-48myb domain protein 58