PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01566.1.p
Common NameLOC105968786, MIMGU_mgv1a009375mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 345aa    MW: 38839.9 Da    PI: 7.0605
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01566.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.14.9e-51111361128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhP+deelv++yL k ++g  +++   + evd++k+ePwd+p +++ + kewyf+++rd+kyatg r+nrat sgyWkatgkd++v+
  Migut.M01566.1.p  11 LPPGFRFHPRDEELVCDYLMKWISGCAHPF-PLLIEVDLNKCEPWDIPVTARVGGKEWYFYCQRDRKYATGLRTNRATISGYWKATGKDRHVI 102
                       79*************************999.7799*************8888899************************************** PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + kg+lvg++ktLvfy grapkg+kt+Wvmhe+r+
  Migut.M01566.1.p 103 R-KGSLVGMRKTLVFYVGRAPKGRKTEWVMHEFRM 136
                       9.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-593163IPR003441NAC domain
PROSITE profilePS5100554.70511163IPR003441NAC domain
PfamPF023656.6E-2612136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MSSLSTVEAK LPPGFRFHPR DEELVCDYLM KWISGCAHPF PLLIEVDLNK CEPWDIPVTA  60
RVGGKEWYFY CQRDRKYATG LRTNRATISG YWKATGKDRH VIRKGSLVGM RKTLVFYVGR  120
APKGRKTEWV MHEFRMEGTR VPAAPKPVSP AKEDWVLCRV FYKSRQEIPG GKTQLEITTE  180
NSYTYSYDVV PPSLPPLITA APPPYNSITF NQTHQYYEQV PCFSIFNTTN QTNPNPSFSL  240
ITQMAADDPP PPLTAPDHVI TPSNFPGDLY NPPFAMMDND DPASNCYDKN VIRDVLKRLT  300
KVESGINNEQ CSMIQGSNSS FGGEGSSDSY LSEADLSSMW NQYS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-4851669171Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01566.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by auxin.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848909.10.0PREDICTED: NAC domain-containing protein 21/22
SwissprotQ84TE62e-92NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLA0A022QIZ70.0A0A022QIZ7_ERYGU; Uncharacterized protein
STRINGMigut.M01566.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13424297
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.24e-87NAC domain containing protein 1
Publications ? help Back to Top
  1. Le Hénanff G, et al.
    Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
    J. Exp. Bot., 2013. 64(16): p. 4877-93
    [PMID:24043850]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  4. Huo X,Wang C,Teng Y,Liu X
    Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
    BMC Plant Biol., 2015. 15: p. 266
    [PMID:26530097]
  5. Chen X, et al.
    Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
    Plant Physiol., 2016. 170(4): p. 2136-45
    [PMID:26850273]
  6. Liu C,Wang B,Li Z,Peng Z,Zhang J
    TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
    Plant Physiol., 2018. 176(1): p. 742-756
    [PMID:29122985]