PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M01958.1.p

Common Name

LOC105950931, MIMGU_mgv1a008977mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Trihelix

Protein Properties

Length: 357aa MW: 39615.7 Da PI: 9.8558

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M01958.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.1	3.5e-16	26	106	2	74
trihelix 2 WtkqevlaLiearremeerlr........rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 W qe+++Liea+r +++r rgk ++ +W++v +++++ + rs++qC++kw+nl +++kk+++ e++ +++ Migut.M01958.1.p 26 WNIQETMVLIEAKRMDDDRRMkrlgdtaeRGKPAELRWKWVEDYCWKNDCLRSQNQCNDKWDNLMRDFKKVRDYERRVAER 106 ************555444422222222578*****************************************997554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.899	18	90	IPR017877	Myb-like domain
Pfam	PF13837	2.8E-10	25	102	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence Send to blast
MDLTVANRGG NINNNNVSRE YRKGNWNIQE TMVLIEAKRM DDDRRMKRLG DTAERGKPAE 60 LRWKWVEDYC WKNDCLRSQN QCNDKWDNLM RDFKKVRDYE RRVAERGFAD SKSYWRIEKN 120 ERKDNNLPSN MLPQIYDALV AVVERKDHRV VVAAPPPPPP PVGGGSNSNI APPPAGNVVG 180 KSTIVYAPMP PLPPPVQQQY PNIVQARPVL LPLPPPPPIA TIPSSQPMPT SDSDTSEYSD 240 SPAKRRRKRR GGGEEGTSGG GGGDTAALQE VGSAITKSAS MIAEAIQSCE EREERRHRQV 300 LRVHERRLQI EESKAEINKQ GINGLVDAIN KLATSILALA ATNKNNQPPP PPSSSK*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence Send to blast

MDLTVANRGG NINNNNVSRE YRKGNWNIQE TMVLIEAKRM DDDRRMKRLG DTAERGKPAE  60
LRWKWVEDYC WKNDCLRSQN QCNDKWDNLM RDFKKVRDYE RRVAERGFAD SKSYWRIEKN  120
ERKDNNLPSN MLPQIYDALV AVVERKDHRV VVAAPPPPPP PVGGGSNSNI APPPAGNVVG  180
KSTIVYAPMP PLPPPVQQQY PNIVQARPVL LPLPPPPPIA TIPSSQPMPT SDSDTSEYSD  240
SPAKRRRKRR GGGEEGTSGG GGGDTAALQE VGSAITKSAS MIAEAIQSCE EREERRHRQV  300
LRVHERRLQI EESKAEINKQ GINGLVDAIN KLATSILALA ATNKNNQPPP PPSSSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	249	KRRRKRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M01958.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012829773.1	0.0	PREDICTED: formin-like protein 7 isoform X2
TrEMBL	A0A022RVB1	0.0	A0A022RVB1_ERYGU; Uncharacterized protein
STRING	Migut.M01958.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4821	22	36

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-49	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Migut.M01958.1.p
Entrez Gene	105950931