PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M01997.1.p

Common Name

MIMGU_mgv11b012866mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

MYB_related

Protein Properties

Length: 159aa MW: 18177.2 Da PI: 9.347

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M01997.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.2e-11	97	150	3	48
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmg...kgRtlkqcksrwqkyl 48 WT E++ l av+ lG + +W+tIa + + Rt+++++ +w++ + Migut.M01997.1.p 97 LWTSAEEKALETAVENLGVEkpgsiHWRTIATEYSdtiQDRTAEDLRYKWRNMM 150 6**************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.298	90	154	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	2.2E-10	90	156	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.22E-10	92	151	IPR009057	Homeodomain-like
SMART	SM00717	4.8E-7	94	152	IPR001005	SANT/Myb domain
Pfam	PF00249	3.5E-8	97	149	IPR001005	SANT/Myb domain
CDD	cd11660	9.57E-8	98	151	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence Send to blast
MAGTSAREMP EGKNKNQDPG KENHVKLNQI DVDGDGNVQA TTSIDKGNVR RPSLMERNKS 60 ARTSEWTEYE PEEETTKNAP LNKPEKENGK NRRVRRLWTS AEEKALETAV ENLGVEKPGS 120 IHWRTIATEY SDTIQDRTAE DLRYKWRNMM KAKEKRYG*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M01997.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012829686.1	1e-77	PREDICTED: uncharacterized protein LOC105950864
TrEMBL	A0A022RT08	1e-111	A0A022RT08_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3774	24	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	5e-06	TRF-like 2

Link Out ? help Back to Top
Phytozome	Migut.M01997.1.p