PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00319.1.p
Common NameMIMGU_mgv1a019305mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 249aa    MW: 28890.1 Da    PI: 8.9762
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00319.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.22.2e-191259148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+ll+++v+++G g+W+ +ar  g++R +k+c++rw +yl
  Migut.N00319.1.p 12 KGPWTAEEDKLLIQYVNLHGEGRWNNVARLAGLKRNGKSCRLRWVNYL 59
                      79********************************************97 PP
2Myb_DNA-binding52.11.5e-1665109147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg  T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
  Migut.N00319.1.p  65 RGQITPHEEMIILELHAKWGNR-WSTIARSLP-GRTDNEIKNYWRTH 109
                       7888******************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.834759IPR017930Myb domain
SuperFamilySSF466894.31E-319106IPR009057Homeodomain-like
SMARTSM007174.4E-171161IPR001005SANT/Myb domain
PfamPF002495.5E-181259IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-241366IPR009057Homeodomain-like
CDDcd001678.69E-131459No hitNo description
PROSITE profilePS5129424.23860114IPR017930Myb domain
SMARTSM007173.7E-1564112IPR001005SANT/Myb domain
PfamPF002496.0E-1465109IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.6E-2467113IPR009057Homeodomain-like
CDDcd001675.71E-1169110No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MGWGVIEQGW RKGPWTAEED KLLIQYVNLH GEGRWNNVAR LAGLKRNGKS CRLRWVNYLR  60
PDLKRGQITP HEEMIILELH AKWGNRWSTI ARSLPGRTDN EIKNYWRTHF KKKATQSSPD  120
TPEKTRAKLL RRQQFQQQRD HQITGTAAKI VSFNTDGSEN RSVTSFGQVR QENAYPSAFD  180
HDQELLYSMI NDYASCVSTH DQVSNNQDTI IWDNGFWNLD DEEYLLHGNF TGSANINNYQ  240
HNFATAFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C2e-261211427128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00319.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843202.10.0PREDICTED: transcription factor MYB21-like
TrEMBLA0A022QXJ40.0A0A022QXJ4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.17e-77myb domain protein 305