PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00373.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 115aa    MW: 13546.4 Da    PI: 10.7283
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00373.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.35.5e-1491112101
               NAM   2 ppGfrFhPtdeel..vveyLkkkvegkkleleev.ikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                        pG+rF P+ e l    +yL kk  +++++++      vd yk +P       +  ++++ewyf + r+kk+++ ++  r++++gyW+a   d
  Migut.N00373.1.p   9 SPGYRFIPKYEYLniSIDYLLKKFGNQPIPVDVDdTGVVDSYKRNPLINSGrhSPLGHSNEWYFSALRNKKNPNRSKLDRKANNGYWRAIRAD 101
                       59*******996632579**********98844447778*******76553223334678********************************* PP

               NAM  90 kevlskkgelvg 101
                       k+++++++  +g
  Migut.N00373.1.p 102 KPIYNRRE--KG 111
                       ****9543..44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-167107IPR003441NAC domain
PROSITE profilePS5100516.3748114IPR003441NAC domain
PfamPF023651.3E-410102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MEITRRKYSP GYRFIPKYEY LNISIDYLLK KFGNQPIPVD VDDTGVVDSY KRNPLINSGR  60
HSPLGHSNEW YFSALRNKKN PNRSKLDRKA NNGYWRAIRA DKPIYNRREK GLRK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00373.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843215.12e-78PREDICTED: NAC domain-containing protein 68-like
TrEMBLA0A022S3793e-26A0A022S379_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.N00373.1.p8e-78(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.14e-15NAC domain containing protein 32