PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00388.1.p
Common NameLOC105963117, MIMGU_mgv1a017674mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 400aa    MW: 44720.5 Da    PI: 8.4394
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00388.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24e-18234282355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++GVr+++ +g+WvAeIr p++   r+r++lg+f taeeAa a++ a+  l+g
  Migut.N00388.1.p 234 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFETAEEAAFAYDTAAYILRG 282
                       8******9.**********955...5**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.62E-30232291No hitNo description
Gene3DG3DSA:3.30.730.108.3E-31233292IPR001471AP2/ERF domain
PROSITE profilePS5103222.049233290IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-22233291IPR016177DNA-binding domain
SMARTSM003806.0E-32233296IPR001471AP2/ERF domain
PfamPF008474.6E-11234281IPR001471AP2/ERF domain
PRINTSPR003671.8E-10234245IPR001471AP2/ERF domain
PRINTSPR003671.8E-10256272IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MENIFPKMEA FMHKAELDHP NIFYVPKPEP LLEKRPISSS ESTAKEVCCN SDTTLNIQLS  60
EFSKEAILRK FHAHSSCFNG YAAINPPRYY YQSESSSSGC NYVGGGNYDN TPMMSFLDQS  120
FPSSTYEPCS PISLSKSPNL GLFLHDPILI QKSAQQNPLF TNMPQLDQTQ LEFSGSPSSS  180
SSNWLKINQN LTNSKGFNDY WLSTTKTQPM KSRSRIEKSA LLPSSSSSPQ GKLFRGVRQR  240
HWGKWVAEIR LPRNRTRVWL GTFETAEEAA FAYDTAAYIL RGDFAHLNFP DMKHRIKSNN  300
SMSNSTVALL EAKLQAISKG VSNNPKKGTI NKDGNAILLS SSDQEKFEEK SLSRKAEAVE  360
IKKSSSEVGM MNLISDVDAV QLSRFPSLDM DMIWDSLLV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-21230290263ATERF1
3gcc_A7e-21230290263ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00388.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842942.10.0PREDICTED: ethylene-responsive transcription factor ERF062
SwissprotQ9SVQ07e-72ERF62_ARATH; Ethylene-responsive transcription factor ERF062
TrEMBLA0A022QYL60.0A0A022QYL6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA109211825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.19e-59ERF family protein