PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00433.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 221aa    MW: 23942.8 Da    PI: 10.2924
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00433.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.3e-11152197655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++Ik Lq
  Migut.N00433.1.p 152 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKTLQ 197
                       689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.062146196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-15149210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.29E-11150201No hitNo description
Gene3DG3DSA:4.10.280.101.0E-14151210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.2E-9152197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-13152202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MKNIKTGFSI TRGIGSYNAK GVAESGRSRL NPQLSFTGQQ PPSAASLSRI SEDHNNAGPS  60
DNDRRKSSRS YSAASGSGSG SGGGYGALGS WDQTHPIIFS VAQPNGAHNI DSQFHFSMSQ  120
EMASMDKLLN IPQDSVTCKI RAKRGFATHP RSIAERERRT RISGKLKKLQ DLVPNMDKQT  180
SYADMLDLAV QHIKTLQNQV QKLHTELDSC TCGCKKTRDS *
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00433.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843217.11e-164PREDICTED: transcription factor bHLH128
SwissprotQ8H1021e-54BH128_ARATH; Transcription factor bHLH128
TrEMBLA0A0H3YBT22e-89A0A0H3YBT2_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.N00433.1.p1e-164(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64552328
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.22e-53bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]